STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sat1N-acetyltransferase domain-containing protein. (153 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.968
srm
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
 0.963
tcf25
Uncharacterized protein.
    
   0.922
LOC103177252
Amine oxidase.
     
 0.902
maob
Amine oxidase.
     
 0.902
rbm17
Uncharacterized protein.
    
   0.723
smox
Spermine oxidase.
      
 0.692
plekhb2
PH domain-containing protein.
      
 0.668
sms
PABS domain-containing protein.
      
 0.663
amd1
S-adenosylmethionine decarboxylase proenzyme-like protein.
      
 0.663
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.