wbp4 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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co-expression

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[Homology]

Score

wbp4

Uncharacterized protein. (415 aa)

Predicted Functional Partners:

zmat2

0.956

snrnp200

0.934

txnl4a

0.933

lsm6

0.928

smu1

0.909

mfap1

0.904

prpf6

0.891

ik

0.864

ppih

0.837

LOC103189549

0.822

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103189549	ik	ENSCMIP00000034618	ENSCMIP00000040828	Uncharacterized protein.	Protein Red-like protein.	0.872
LOC103189549	lsm6	ENSCMIP00000034618	ENSCMIP00000019239	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm6.	0.649
LOC103189549	mfap1	ENSCMIP00000034618	ENSCMIP00000022162	Uncharacterized protein.	Microfibrillar-associated protein 1-like protein.	0.872
LOC103189549	prpf6	ENSCMIP00000034618	ENSCMIP00000028890	Uncharacterized protein.	Uncharacterized protein.	0.781
LOC103189549	smu1	ENSCMIP00000034618	ENSCMIP00000026263	Uncharacterized protein.	Uncharacterized protein.	0.885
LOC103189549	snrnp200	ENSCMIP00000034618	ENSCMIP00000022410	Uncharacterized protein.	Uncharacterized protein.	0.712
LOC103189549	txnl4a	ENSCMIP00000034618	ENSCMIP00000036132	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.737
LOC103189549	wbp4	ENSCMIP00000034618	ENSCMIP00000011455	Uncharacterized protein.	Uncharacterized protein.	0.822
LOC103189549	zmat2	ENSCMIP00000034618	ENSCMIP00000041211	Uncharacterized protein.	U1-type domain-containing protein.	0.871
ik	LOC103189549	ENSCMIP00000040828	ENSCMIP00000034618	Protein Red-like protein.	Uncharacterized protein.	0.872
ik	lsm6	ENSCMIP00000040828	ENSCMIP00000019239	Protein Red-like protein.	U6 snRNA-associated Sm-like protein LSm6.	0.604
ik	mfap1	ENSCMIP00000040828	ENSCMIP00000022162	Protein Red-like protein.	Microfibrillar-associated protein 1-like protein.	0.973
ik	ppih	ENSCMIP00000040828	ENSCMIP00000017057	Protein Red-like protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.620
ik	prpf6	ENSCMIP00000040828	ENSCMIP00000028890	Protein Red-like protein.	Uncharacterized protein.	0.986
ik	smu1	ENSCMIP00000040828	ENSCMIP00000026263	Protein Red-like protein.	Uncharacterized protein.	0.995
ik	snrnp200	ENSCMIP00000040828	ENSCMIP00000022410	Protein Red-like protein.	Uncharacterized protein.	0.604
ik	txnl4a	ENSCMIP00000040828	ENSCMIP00000036132	Protein Red-like protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.864
ik	wbp4	ENSCMIP00000040828	ENSCMIP00000011455	Protein Red-like protein.	Uncharacterized protein.	0.864
ik	zmat2	ENSCMIP00000040828	ENSCMIP00000041211	Protein Red-like protein.	U1-type domain-containing protein.	0.864
lsm6	LOC103189549	ENSCMIP00000019239	ENSCMIP00000034618	U6 snRNA-associated Sm-like protein LSm6.	Uncharacterized protein.	0.649