STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkar1bUncharacterized protein. (390 aa)    
Predicted Functional Partners:
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.989
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.988
prkx
Uncharacterized protein.
 
 
 0.955
prkar2b
Uncharacterized protein.
  
  
 
0.906
prkar1a
Uncharacterized protein.
  
  
 
0.901
akap1
A-kinase anchor protein 1, mitochondrial.
    
 0.817
akap10
Uncharacterized protein.
    
 0.755
gpr161
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.687
rsph3
Radial spoke 3-like protein.
   
 0.680
Akap11
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 
 0.662
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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