STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000011619Uncharacterized protein. (307 aa)    
Predicted Functional Partners:
pcsk4
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
 
 0.576
furin
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
 
 0.576
pggt1b
Uncharacterized protein.
     
  0.542
ENSCMIP00000009881
GB1/RHD3-type G domain-containing protein.
  
     0.510
ENSCMIP00000013651
GB1/RHD3-type G domain-containing protein.
  
     0.510
ENSCMIP00000025202
CARD domain-containing protein.
   
 
 0.479
caspase-1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 
 0.479
fnta
Uncharacterized protein.
     
  0.461
LOC103179140
Protein kinase domain-containing protein.
     
  0.461
LOC103176699
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
     
  0.461
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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