Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000011669Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
Mei1
Uncharacterized protein.
 
     0.764
ENSCMIP00000011681
Uncharacterized protein.
 
     0.665
rec114
Uncharacterized protein.
      
 0.588
katnbl1
Katanin_con80 domain-containing protein.
      
 0.553
LOC103190117
Synaptonemal complex protein 3.
      
 0.514
hormad1
HORMA domain-containing protein.
      
 0.512
pmpca
Uncharacterized protein; Belongs to the peptidase M16 family.
    
   0.508
ENSCMIP00000036594
TP6A_N domain-containing protein.
      
 0.507
katnb1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
      
 0.502
sycp1
Uncharacterized protein.
      
 0.469
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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