STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000011686Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
cfap298
Uncharacterized protein.
    
 
 0.633
pih1d3
PIH1_CS domain-containing protein.
    
 
 0.588
dnaaf5
Uncharacterized protein.
    
 
 0.588
lrrc6
LRRcap domain-containing protein.
      
 0.570
dnai1
Dynein intermediate chain 1, axonemal.
      
 0.555
rps27a
Ubiquitin-like domain-containing protein.
    
  0.530
lrrc56
Uncharacterized protein.
      
 0.530
uba52
Ribosomal protein L40-like isoform 1.
    
 0.520
cfap52
WD repeat domain 16.
    
 
 0.513
pih1d2
Uncharacterized protein.
   
 
 0.509
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.