Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ankdd1aUncharacterized protein. (459 aa)    
Predicted Functional Partners:
drc7
Uncharacterized protein.
    
 
 0.624
ENSCMIP00000010430
RIIa domain-containing protein.
      
 0.617
Tmem119
Uncharacterized protein.
    
 
 0.611
tagap
Rho-GAP domain-containing protein.
      
 0.586
sh3bp4
Uncharacterized protein.
      
 0.532
grtp1
Growth hormone-regulated TBC protein 1-like protein.
    
 
 0.498
arhgap29
Uncharacterized protein.
     
 0.453
arhgap45
Uncharacterized protein.
     
 0.453
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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