STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cabin1TPR_REGION domain-containing protein. (2172 aa)    
Predicted Functional Partners:
ENSCMIP00000009700
MADS-box domain-containing protein.
    
 
 0.953
LOC103188581
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.952
ubn1
Uncharacterized protein.
   
 0.945
asf1a
Uncharacterized protein.
    
 0.856
asf1b
Uncharacterized protein.
    
 0.856
fau
Ubiquitin-like domain-containing protein.
   
  0.709
stk40
Protein kinase domain-containing protein.
      
 0.641
LOC103184961
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
   
  
 0.614
mef2a
Myocyte-specific enhancer factor 2A.
    
 
 0.582
mef2c
Myocyte-specific enhancer factor 2C-like protein.
    
 
 0.582
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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