LOC103171617 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103171617

Uncharacterized protein. (606 aa)

Predicted Functional Partners:

smc3

0.995

LOC103173728

0.966

smc1b

0.966

stag2

0.962

stag1

0.962

ENSCMIP00000039289

0.962

pds5a

0.918

pds5b

0.918

smc5

0.910

rad21

0.903

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000039289	LOC103171617	ENSCMIP00000039289	ENSCMIP00000011775	Uncharacterized protein.	Uncharacterized protein.	0.962
ENSCMIP00000039289	LOC103173728	ENSCMIP00000039289	ENSCMIP00000004077	Uncharacterized protein.	Uncharacterized protein.	0.941
ENSCMIP00000039289	pds5a	ENSCMIP00000039289	ENSCMIP00000027591	Uncharacterized protein.	Uncharacterized protein.	0.829
ENSCMIP00000039289	pds5b	ENSCMIP00000039289	ENSCMIP00000046735	Uncharacterized protein.	Uncharacterized protein.	0.829
ENSCMIP00000039289	rad21	ENSCMIP00000039289	ENSCMIP00000044430	Uncharacterized protein.	Uncharacterized protein.	0.971
ENSCMIP00000039289	smc1b	ENSCMIP00000039289	ENSCMIP00000033509	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.941
ENSCMIP00000039289	smc3	ENSCMIP00000039289	ENSCMIP00000046001	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.969
ENSCMIP00000039289	smc5	ENSCMIP00000039289	ENSCMIP00000023482	Uncharacterized protein.	AAA_23 domain-containing protein.	0.735
ENSCMIP00000039289	stag1	ENSCMIP00000039289	ENSCMIP00000038372	Uncharacterized protein.	SCD domain-containing protein.	0.901
ENSCMIP00000039289	stag2	ENSCMIP00000039289	ENSCMIP00000036905	Uncharacterized protein.	SCD domain-containing protein.	0.902
LOC103171617	ENSCMIP00000039289	ENSCMIP00000011775	ENSCMIP00000039289	Uncharacterized protein.	Uncharacterized protein.	0.962
LOC103171617	LOC103173728	ENSCMIP00000011775	ENSCMIP00000004077	Uncharacterized protein.	Uncharacterized protein.	0.966
LOC103171617	pds5a	ENSCMIP00000011775	ENSCMIP00000027591	Uncharacterized protein.	Uncharacterized protein.	0.918
LOC103171617	pds5b	ENSCMIP00000011775	ENSCMIP00000046735	Uncharacterized protein.	Uncharacterized protein.	0.918
LOC103171617	rad21	ENSCMIP00000011775	ENSCMIP00000044430	Uncharacterized protein.	Uncharacterized protein.	0.903
LOC103171617	smc1b	ENSCMIP00000011775	ENSCMIP00000033509	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.966
LOC103171617	smc3	ENSCMIP00000011775	ENSCMIP00000046001	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.995
LOC103171617	smc5	ENSCMIP00000011775	ENSCMIP00000023482	Uncharacterized protein.	AAA_23 domain-containing protein.	0.910
LOC103171617	stag1	ENSCMIP00000011775	ENSCMIP00000038372	Uncharacterized protein.	SCD domain-containing protein.	0.962
LOC103171617	stag2	ENSCMIP00000011775	ENSCMIP00000036905	Uncharacterized protein.	SCD domain-containing protein.	0.962