STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eif1bSUI1 domain-containing protein. (156 aa)    
Predicted Functional Partners:
fau
Ubiquitin-like domain-containing protein.
   
 
 0.960
rps3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.922
eif5
Eukaryotic translation initiation factor 5-like protein.
   
 
 0.911
rps2
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.911
eif2s2
eIF2B_5 domain-containing protein.
   
 
 0.890
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.889
Rps11
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.888
rps4x
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
  
 
 0.882
rps23
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.881
rps27a
Ubiquitin-like domain-containing protein.
   
 
 0.880
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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