STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl10aRibosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)    
Predicted Functional Partners:
rpl30
Ribosomal_L7Ae domain-containing protein.
   
 0.997
fau
Ubiquitin-like domain-containing protein.
   
 0.997
rps27a
Ubiquitin-like domain-containing protein.
   
 0.996
rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.996
rpl21
60S ribosomal protein L21.
   
 0.996
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.996
rpl31
Uncharacterized protein.
  
 0.996
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.995
rpl34
Uncharacterized protein.
   
 0.995
rpl26l1
Ribosomal protein L26 isoform 1.
  
 0.995
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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