Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gcn1Translational activator GCN1. (2667 aa)    
Predicted Functional Partners:
drg2
OBG-type G domain-containing protein.
   
 
 0.942
rwdd1
RWD domain-containing protein 1.
    
 
 0.941
Rpl19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
   0.926
eef2
Tr-type G domain-containing protein.
   
 
 0.897
LOC103171862
ABC transporter domain-containing protein.
   
 
 0.876
abcf3
ABC transporter domain-containing protein.
   
 
 0.876
mtrex
Uncharacterized protein.
   
 
 0.856
eef1g
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.849
rps13
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.845
Rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.837
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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