STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000012145PH domain-containing protein. (453 aa)    
Predicted Functional Partners:
Cnksr3
Uncharacterized protein.
 
      0.899
samd12
SAM domain-containing protein.
    
 0.783
raf1
Uncharacterized protein.
    
 0.766
braf
Uncharacterized protein.
    
 0.766
ksr2
Uncharacterized protein.
    
 0.733
ksr1
Uncharacterized protein.
    
 0.733
map2k5
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.633
map2k1
Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
 0.633
map2k2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.633
Samd10
SAM domain-containing protein.
    
 0.562
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.