Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000012201Olfactomedin-like domain-containing protein. (298 aa)    
Predicted Functional Partners:
ENSCMIP00000047002
SUEL-type lectin domain-containing protein.
 
 
   0.892
lrig1
Uncharacterized protein.
    
 
 0.792
dclk1
Uncharacterized protein.
      
 0.661
lgr4
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.642
lgr5
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.642
ENSCMIP00000007108
RING-type domain-containing protein.
      
 0.596
pcgf2
RING-type domain-containing protein.
      
 0.596
fabp2
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.588
LOC103182633
Uncharacterized protein.
   
  
 0.580
Foxl1
Fork-head domain-containing protein.
      
 0.555
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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