vdac1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

vdac1

Uncharacterized protein. (296 aa)

Predicted Functional Partners:

vdac2

0.972

slc25a5

0.955

slc25a4

0.955

ppid

0.913

sqstm1

0.889

ENSCMIP00000010017

0.872

prkn

0.854

bcl2l1

0.828

ppif

0.827

ENSCMIP00000003208

0.804

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000003208	ENSCMIP00000010017	ENSCMIP00000003208	ENSCMIP00000010017	Uncharacterized protein.	Uncharacterized protein.	0.804
ENSCMIP00000003208	prkn	ENSCMIP00000003208	ENSCMIP00000008666	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.517
ENSCMIP00000003208	vdac1	ENSCMIP00000003208	ENSCMIP00000012226	Uncharacterized protein.	Uncharacterized protein.	0.804
ENSCMIP00000003208	vdac2	ENSCMIP00000003208	ENSCMIP00000020610	Uncharacterized protein.	Uncharacterized protein.	0.804
ENSCMIP00000010017	ENSCMIP00000003208	ENSCMIP00000010017	ENSCMIP00000003208	Uncharacterized protein.	Uncharacterized protein.	0.804
ENSCMIP00000010017	bcl2l1	ENSCMIP00000010017	ENSCMIP00000035465	Uncharacterized protein.	BH4_2 domain-containing protein.	0.505
ENSCMIP00000010017	prkn	ENSCMIP00000010017	ENSCMIP00000008666	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.776
ENSCMIP00000010017	slc25a4	ENSCMIP00000010017	ENSCMIP00000035004	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.507
ENSCMIP00000010017	slc25a5	ENSCMIP00000010017	ENSCMIP00000032594	Uncharacterized protein.	Adenine nucleotide translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.507
ENSCMIP00000010017	sqstm1	ENSCMIP00000010017	ENSCMIP00000013654	Uncharacterized protein.	Uncharacterized protein.	0.685
ENSCMIP00000010017	vdac1	ENSCMIP00000010017	ENSCMIP00000012226	Uncharacterized protein.	Uncharacterized protein.	0.872
ENSCMIP00000010017	vdac2	ENSCMIP00000010017	ENSCMIP00000020610	Uncharacterized protein.	Uncharacterized protein.	0.546
bcl2l1	ENSCMIP00000010017	ENSCMIP00000035465	ENSCMIP00000010017	BH4_2 domain-containing protein.	Uncharacterized protein.	0.505
bcl2l1	prkn	ENSCMIP00000035465	ENSCMIP00000008666	BH4_2 domain-containing protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.422
bcl2l1	vdac1	ENSCMIP00000035465	ENSCMIP00000012226	BH4_2 domain-containing protein.	Uncharacterized protein.	0.828
bcl2l1	vdac2	ENSCMIP00000035465	ENSCMIP00000020610	BH4_2 domain-containing protein.	Uncharacterized protein.	0.505
ppid	slc25a4	ENSCMIP00000021047	ENSCMIP00000035004	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.933
ppid	slc25a5	ENSCMIP00000021047	ENSCMIP00000032594	Uncharacterized protein.	Adenine nucleotide translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.933
ppid	vdac1	ENSCMIP00000021047	ENSCMIP00000012226	Uncharacterized protein.	Uncharacterized protein.	0.913
ppid	vdac2	ENSCMIP00000021047	ENSCMIP00000020610	Uncharacterized protein.	Uncharacterized protein.	0.844