STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vdac1Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
vdac2
Uncharacterized protein.
  
 
0.996
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.992
slc25a5
Adenine nucleotide translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.989
slc25a4
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.989
slc25a31
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.989
ENSCMIP00000010017
Uncharacterized protein.
  
 
0.978
bcl2l1
BH4_2 domain-containing protein.
    
 
 0.966
sqstm1
Uncharacterized protein.
   
 0.934
slc25a3
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.902
ENSCMIP00000016854
Phosphagen kinase C-terminal domain-containing protein; Belongs to the ATP:guanido phosphotransferase family.
    
 0.893
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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