STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxl21pF-box domain-containing protein. (448 aa)    
Predicted Functional Partners:
cul1
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.731
skp1
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.660
LOC103182116
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.660
rbx1
RING-type domain-containing protein.
    
 0.614
LOC103183360
CCDC92 domain-containing protein.
      
 0.613
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.593
commd4
COMM domain-containing protein 4-like protein.
    
 0.583
dpy19l1
Protein dpy-19-like 1-like protein.
      
 0.547
cacul1
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.527
cry1
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.524
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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