STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aimp2Thioredoxin_16 domain-containing protein. (308 aa)    
Predicted Functional Partners:
eprs1
Uncharacterized protein.
   
 0.999
mars1
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.999
eef1e1
GST C-terminal domain-containing protein.
   
 0.988
qars1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.983
aimp1
tRNA-binding domain-containing protein.
   
 0.981
kars1
Lysine--tRNA ligase.
   
 0.977
rars2
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.961
dars1
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.943
yars1
Tyrosine--tRNA ligase.
   
 0.930
lars1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.907
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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