nova1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

nova1

Uncharacterized protein. (552 aa)

Predicted Functional Partners:

Bola3

0.553

lrrtm1

0.530

slc25a19

0.525

hars1

0.521

stil

0.520

hnrnpk

0.505

rbfox1

0.455

LOC103189540

0.455

hnrnpa1

0.453

hnrnpa2b1

0.453

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bola3	nova1	ENSCMIP00000002115	ENSCMIP00000013553	Uncharacterized protein.	Uncharacterized protein.	0.553
LOC103189540	hnrnpa1	ENSCMIP00000034572	ENSCMIP00000000190	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	Uncharacterized protein.	0.423
LOC103189540	hnrnpa2b1	ENSCMIP00000034572	ENSCMIP00000013702	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	Heterogeneous nuclear ribonucleoproteins A2/B1-like protein.	0.429
LOC103189540	nova1	ENSCMIP00000034572	ENSCMIP00000013553	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	Uncharacterized protein.	0.455
hars1	lrrtm1	ENSCMIP00000041172	ENSCMIP00000031089	AA_TRNA_LIGASE_II domain-containing protein.	LRRCT domain-containing protein.	0.520
hars1	nova1	ENSCMIP00000041172	ENSCMIP00000013553	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.521
hars1	slc25a19	ENSCMIP00000041172	ENSCMIP00000043218	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.493
hars1	stil	ENSCMIP00000041172	ENSCMIP00000047256	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.493
hnrnpa1	LOC103189540	ENSCMIP00000000190	ENSCMIP00000034572	Uncharacterized protein.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.423
hnrnpa1	hnrnpk	ENSCMIP00000000190	ENSCMIP00000032849	Uncharacterized protein.	Uncharacterized protein.	0.984
hnrnpa1	nova1	ENSCMIP00000000190	ENSCMIP00000013553	Uncharacterized protein.	Uncharacterized protein.	0.453
hnrnpa2b1	LOC103189540	ENSCMIP00000013702	ENSCMIP00000034572	Heterogeneous nuclear ribonucleoproteins A2/B1-like protein.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.429
hnrnpa2b1	hnrnpk	ENSCMIP00000013702	ENSCMIP00000032849	Heterogeneous nuclear ribonucleoproteins A2/B1-like protein.	Uncharacterized protein.	0.849
hnrnpa2b1	nova1	ENSCMIP00000013702	ENSCMIP00000013553	Heterogeneous nuclear ribonucleoproteins A2/B1-like protein.	Uncharacterized protein.	0.453
hnrnpk	hnrnpa1	ENSCMIP00000032849	ENSCMIP00000000190	Uncharacterized protein.	Uncharacterized protein.	0.984
hnrnpk	hnrnpa2b1	ENSCMIP00000032849	ENSCMIP00000013702	Uncharacterized protein.	Heterogeneous nuclear ribonucleoproteins A2/B1-like protein.	0.849
hnrnpk	nova1	ENSCMIP00000032849	ENSCMIP00000013553	Uncharacterized protein.	Uncharacterized protein.	0.505
lrrtm1	hars1	ENSCMIP00000031089	ENSCMIP00000041172	LRRCT domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.520
lrrtm1	nova1	ENSCMIP00000031089	ENSCMIP00000013553	LRRCT domain-containing protein.	Uncharacterized protein.	0.530
nova1	Bola3	ENSCMIP00000013553	ENSCMIP00000002115	Uncharacterized protein.	Uncharacterized protein.	0.553