STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbx3Chromobox protein-like 3-like protein. (195 aa)    
Predicted Functional Partners:
LOC103173106
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
   
 0.861
ehmt1
Uncharacterized protein.
    
 0.816
e2f6
E2F_TDP domain-containing protein.
   
 0.752
l3mbtl2
FCS-type domain-containing protein.
    
 0.720
mbtd1
FCS-type domain-containing protein.
    
 0.720
rnf2
RING-type domain-containing protein.
    
 0.710
LOC103173215
Histone H3; Belongs to the histone H3 family.
   
 0.709
ENSCMIP00000011641
Histone H3; Belongs to the histone H3 family.
   
 0.709
h3f3a
Histone domain-containing protein.
   
 0.709
h3f3b
Histone domain-containing protein.
   
 0.709
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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