STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc12TPR_REGION domain-containing protein. (803 aa)    
Predicted Functional Partners:
trappc11
Uncharacterized protein.
   
 0.993
trappc8
Uncharacterized protein.
    
 0.992
trappc13
Uncharacterized protein.
    
 0.991
trappc2l
Uncharacterized protein.
    
 0.988
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.987
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.985
trappc2
Uncharacterized protein.
    
 0.984
trappc9
Uncharacterized protein.
   
 0.978
trappc10
Uncharacterized protein.
    
 0.975
ENSCMIP00000001722
Uncharacterized protein.
    
 0.880
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.