STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
allcUncharacterized protein. (441 aa)    
Predicted Functional Partners:
LOC103188039
Amidohydro-rel domain-containing protein.
 
 
 0.879
LOC103174706
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
  
  
 0.788
Rpl36al
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.723
asl
Argininosuccinate lyase.
      
 0.689
LOC103181301
Uncharacterized protein.
  
  
 0.638
LOC103186924
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.632
LOC103180406
Glutamine synthetase.
   
 
 0.609
otc
Ornithine transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
      
 0.607
ENSCMIP00000040893
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.590
pex13
SH3 domain-containing protein.
   
 
 0.584
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.