pank3 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pank3

Uncharacterized protein. (385 aa)

Predicted Functional Partners:

coasy

0.967

ppcs

0.958

pank1

0.901

LOC103182285

0.900

LOC103182286

0.900

gas8

0.629

ppcdc

0.595

ccdc65

0.467

LOC103182334

0.441

dnali1

0.441

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103182285	LOC103182286	ENSCMIP00000022320	ENSCMIP00000023627	SMB domain-containing protein.	Uncharacterized protein.	0.902
LOC103182285	coasy	ENSCMIP00000022320	ENSCMIP00000018710	SMB domain-containing protein.	Bifunctional coenzyme A synthase-like protein.	0.900
LOC103182285	pank1	ENSCMIP00000022320	ENSCMIP00000045821	SMB domain-containing protein.	Uncharacterized protein.	0.900
LOC103182285	pank3	ENSCMIP00000022320	ENSCMIP00000015295	SMB domain-containing protein.	Uncharacterized protein.	0.900
LOC103182286	LOC103182285	ENSCMIP00000023627	ENSCMIP00000022320	Uncharacterized protein.	SMB domain-containing protein.	0.902
LOC103182286	coasy	ENSCMIP00000023627	ENSCMIP00000018710	Uncharacterized protein.	Bifunctional coenzyme A synthase-like protein.	0.900
LOC103182286	pank1	ENSCMIP00000023627	ENSCMIP00000045821	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC103182286	pank3	ENSCMIP00000023627	ENSCMIP00000015295	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC103182334	ccdc65	ENSCMIP00000026569	ENSCMIP00000026079	Uncharacterized protein.	NYD-SP28 domain-containing protein.	0.610
LOC103182334	gas8	ENSCMIP00000026569	ENSCMIP00000035732	Uncharacterized protein.	GAS domain-containing protein.	0.683
LOC103182334	pank1	ENSCMIP00000026569	ENSCMIP00000045821	Uncharacterized protein.	Uncharacterized protein.	0.441
LOC103182334	pank3	ENSCMIP00000026569	ENSCMIP00000015295	Uncharacterized protein.	Uncharacterized protein.	0.441
ccdc65	LOC103182334	ENSCMIP00000026079	ENSCMIP00000026569	NYD-SP28 domain-containing protein.	Uncharacterized protein.	0.610
ccdc65	dnali1	ENSCMIP00000026079	ENSCMIP00000031187	NYD-SP28 domain-containing protein.	Uncharacterized protein.	0.610
ccdc65	gas8	ENSCMIP00000026079	ENSCMIP00000035732	NYD-SP28 domain-containing protein.	GAS domain-containing protein.	0.748
ccdc65	pank1	ENSCMIP00000026079	ENSCMIP00000045821	NYD-SP28 domain-containing protein.	Uncharacterized protein.	0.467
ccdc65	pank3	ENSCMIP00000026079	ENSCMIP00000015295	NYD-SP28 domain-containing protein.	Uncharacterized protein.	0.467
coasy	LOC103182285	ENSCMIP00000018710	ENSCMIP00000022320	Bifunctional coenzyme A synthase-like protein.	SMB domain-containing protein.	0.900
coasy	LOC103182286	ENSCMIP00000018710	ENSCMIP00000023627	Bifunctional coenzyme A synthase-like protein.	Uncharacterized protein.	0.900
coasy	gas8	ENSCMIP00000018710	ENSCMIP00000035732	Bifunctional coenzyme A synthase-like protein.	GAS domain-containing protein.	0.686