STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gfod1Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
tgds
NAD(P)-bd_dom domain-containing protein.
  
 
 0.661
rgn
Regucalcin.
  
 
 0.622
galk2
Uncharacterized protein.
  
 
 0.554
galk1
Uncharacterized protein.
  
 
 0.554
kars1
Lysine--tRNA ligase.
  
    0.553
h6pd
Uncharacterized protein.
  
 
 0.530
nmnat1
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.467
nmnat3
Nicotinamide-nucleotide adenylyltransferase.
   
 
 0.467
mboat1
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
  
  
 0.457
adk
PfkB domain-containing protein.
  
  
 0.457
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.