STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnpo1Importin N-terminal domain-containing protein. (907 aa)    
Predicted Functional Partners:
zc3h14
Uncharacterized protein.
    
 
 0.800
ENSCMIP00000004307
Uncharacterized protein.
   
 
 0.756
nup98
Peptidase S59 domain-containing protein.
   
 0.727
ipo5
Importin N-terminal domain-containing protein.
   
 
0.713
ENSCMIP00000020451
Uncharacterized protein.
   
 0.690
ran
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.690
adgrd1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
 0.690
ENSCMIP00000004601
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.688
exosc7
Uncharacterized protein.
   
 
  0.631
exosc8
Uncharacterized protein.
   
 
  0.631
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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