STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol8RRM domain-containing protein. (1194 aa)    
Predicted Functional Partners:
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
  
 0.767
LOC103186513
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.687
LOC103186514
Uncharacterized protein.
   
 
 0.670
sdad1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
  
 0.628
nip7
PUA domain-containing protein.
    
 
 0.618
znhit6
HIT-type domain-containing protein.
   
  
 0.605
bccip
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.599
h6pd
Uncharacterized protein.
      
 0.553
ENSCMIP00000000904
CENP-F_N domain-containing protein.
     
 0.552
ENSCMIP00000041644
Uncharacterized protein.
   
  
 0.530
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.