STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103188298Uncharacterized protein; Belongs to the cytochrome P450 family. (509 aa)    
Predicted Functional Partners:
LOC103189020
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.906
LOC103171668
Aldo_ket_red domain-containing protein.
     
 0.903
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.798
fdft1
Uncharacterized protein.
  
 
 0.706
sqle
Squalene monooxygenase.
   
 0.696
erg28
Uncharacterized protein.
   
 
 0.696
hsd17b7
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 
 0.695
sigmar1
Uncharacterized protein.
   
 
 0.686
ENSCMIP00000002158
Uncharacterized protein.
   
 0.650
LOC103186385
Cholesterol 25-hydroxylase-like protein 2; Belongs to the sterol desaturase family.
   
 0.650
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.