STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tapt1Uncharacterized protein. (540 aa)    
Predicted Functional Partners:
cstf1
WD_REPEATS_REGION domain-containing protein.
 
      0.831
suco
SUN domain-containing protein.
    
   0.669
ENSCMIP00000011956
Uncharacterized protein.
      
 0.596
smc3
Structural maintenance of chromosomes protein.
 
      0.566
lap3
CYTOSOL_AP domain-containing protein.
      
 0.549
nsun7
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.549
haus3
HAUS augmin-like complex subunit 3.
      
 0.549
ins
Insulin A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
      
 0.548
zfyve1
Uncharacterized protein.
   
    0.535
ENSCMIP00000001022
FYVE-type domain-containing protein.
   
    0.482
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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