STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmd11PCI domain-containing protein. (461 aa)    
Predicted Functional Partners:
Psmd4
Uncharacterized protein.
   
 0.999
psma3
Proteasome subunit alpha type.
   
 0.999
LOC103171909
Proteasome subunit alpha type.
   
 0.999
psma2
Proteasome endopeptidase complex.
   
 0.999
psma5
Proteasome subunit alpha type.
   
 0.999
psmb1
Proteasome subunit beta.
   
 0.999
psmd8
PCI domain-containing protein.
   
 0.999
psmd6
PCI domain-containing protein.
   
 0.999
psmd14
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14.
   
 0.999
psmc3
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.