STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
March1RING-CH-type domain-containing protein. (254 aa)    
Predicted Functional Partners:
cnot2
NOT2_3_5 domain-containing protein.
    
 
 0.572
Ube2g2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.452
vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.438
spata5
Uncharacterized protein.
    
 
 0.438
spata5l1
Uncharacterized protein.
    
 
 0.438
LOC103190469
UBX domain-containing protein.
    
 
 0.427
LOC103190646
UAS domain-containing protein.
    
 
 0.427
faf2
UBX domain-containing protein.
    
 
 0.427
rev1
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.
   
  
 0.412
ube2j2
Ubiquitin-conjugating enzyme E2, J2.
    
 
 0.401
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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