STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tanc2Uncharacterized protein. (2067 aa)    
Predicted Functional Partners:
ppp6c
Serine/threonine-protein phosphatase.
    
 0.607
ENSCMIP00000021664
Uncharacterized protein.
      
 0.553
fjx1
Uncharacterized protein.
      
 0.552
armc6
Uncharacterized protein.
      
 0.548
ppp6r1
Uncharacterized protein.
    
 0.513
ppp6r3
Uncharacterized protein.
    
 0.513
dcaf17
Uncharacterized protein.
      
 0.476
lrfn5
Uncharacterized protein.
    
 0.468
ift81
IFT81_CH domain-containing protein.
    
 0.453
dohh
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
   
  
 0.429
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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