STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfyve26FYVE-type domain-containing protein. (2431 aa)    
Predicted Functional Partners:
spg11
Spatacsin_C domain-containing protein.
   
 
 0.765
tecpr2
Uncharacterized protein.
   
  
 0.675
trip12
Putative E3 ubiquitin-protein ligase TRIP12.
      
 0.667
ap5z1
Uncharacterized protein.
      
 0.654
ift80
WD_REPEATS_REGION domain-containing protein.
      
 0.637
Ap5s1
Uncharacterized protein.
    
 
 0.591
eif1ax
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
      
 0.590
mrnip
Uncharacterized protein.
      
 0.553
ttc19
TPR_MalT domain-containing protein.
      
 0.553
uimc1
RAP80_UIM domain-containing protein.
      
 0.553
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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