STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csCitrate synthase; Belongs to the citrate synthase family. (473 aa)    
Predicted Functional Partners:
aco2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.998
mdh2
Malate dehydrogenase, mitochondrial-like protein; Belongs to the LDH/MDH superfamily.
  
 0.998
aco1
Uncharacterized protein; Belongs to the aconitase/IPM isomerase family.
  
 0.996
sdhb
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.995
acly
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
  
 0.994
LOC103191583
Peripheral subunit-binding (PSBD) domain-containing protein.
  
 0.985
mdh1
Cytosolic malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.983
LOC103172058
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
  
 0.983
acss1
Acetyl-coenzyme A synthetase.
  
 0.977
LOC103181051
Acetyl-coenzyme A synthetase.
  
 0.977
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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