STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl6BTB domain-containing protein. (610 aa)    
Predicted Functional Partners:
bbs9
Uncharacterized protein.
    
 0.664
Bbs1
BBS1 domain-containing protein.
    
 0.658
ptpn14
Uncharacterized protein.
      
 0.648
bbs4
Bardet-Biedl syndrome 4 protein.
    
 0.645
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.627
ttc8
TPR_REGION domain-containing protein.
    
 0.612
skap2
Uncharacterized protein.
   
  
 0.565
rbx1
RING-type domain-containing protein.
    
 0.560
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.559
klhdc2
Uncharacterized protein.
      
 0.558
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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