STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tp53i3PKS_ER domain-containing protein. (323 aa)    
Predicted Functional Partners:
ei24
Etoposide-induced protein 2.4-like protein.
     
 0.900
rpa1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
 
      0.711
ENSCMIP00000001257
Uncharacterized protein.
 
 0.617
hsdl2
SCP2 domain-containing protein.
  
 0.553
LOC103183591
Carrier domain-containing protein.
  
 0.499
fasn
Carrier domain-containing protein.
  
0.499
adhfe1
Fe-ADH domain-containing protein.
     
 0.465
cryzl1
PKS_ER domain-containing protein.
  
   
 0.437
atp5f1d
ATP synthase subunit delta, mitochondrial-like protein.
   
 0.406
aasdh
Carrier domain-containing protein.
  
 
 0.404
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.