STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgdigUncharacterized protein. (221 aa)    
Predicted Functional Partners:
cdc42
Cell division control protein 42-like protein.
   
 0.873
LOC103173289
Uncharacterized protein.
    
 0.810
rhoc
Uncharacterized protein.
   
 0.795
ENSCMIP00000036907
Uncharacterized protein.
   
 0.795
rhoa
Uncharacterized protein.
   
 0.795
rac1
Uncharacterized protein.
   
 0.789
LOC103191021
Uncharacterized protein.
   
 0.789
rac3
Uncharacterized protein.
   
 0.789
ENSCMIP00000003261
Uncharacterized protein.
   
 0.788
rnd3
Rho-related GTP-binding protein RhoE-like protein.
   
 0.788
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.