STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap6Rho-GAP domain-containing protein. (779 aa)    
Predicted Functional Partners:
LOC103174637
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
      
 0.590
rhoc
Uncharacterized protein.
    
 0.567
ENSCMIP00000036907
Uncharacterized protein.
    
 0.567
rhoa
Uncharacterized protein.
    
 0.567
aspm
Uncharacterized protein.
   
   0.561
ENSCMIP00000003261
Uncharacterized protein.
    
 0.560
rnd3
Rho-related GTP-binding protein RhoE-like protein.
    
 0.560
unc50
Uncharacterized protein.
      
 0.552
cdc42
Cell division control protein 42-like protein.
    
 0.532
rhof
Rho-related GTP-binding protein RhoF-like protein.
    
 0.528
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.