STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnksr2Uncharacterized protein. (1012 aa)    
Predicted Functional Partners:
raf1
Uncharacterized protein.
    
 0.632
braf
Uncharacterized protein.
    
 0.632
ksr2
Uncharacterized protein.
    
 0.616
ksr1
Uncharacterized protein.
    
 0.616
map2k5
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.496
map2k1
Dual specificity mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
    
 0.496
map2k2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.496
samd12
SAM domain-containing protein.
    
 0.491
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
     
 0.483
rap1b
Uncharacterized protein.
    
 0.476
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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