STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
extl2Glyco_transf_64 domain-containing protein. (321 aa)    
Predicted Functional Partners:
extl3
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
    
0.911
LOC103184956
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
    
0.756
LOC103185802
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
    
0.756
ENSCMIP00000042428
Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.
    
 0.756
LOC103179627
Uncharacterized protein; Belongs to the glycosyltransferase 47 family.
    
0.756
sdc1
4.1m domain-containing protein.
     
 0.549
Sdc3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.505
hgsnat
DUF5009 domain-containing protein.
   
  
 0.502
fam20b
Glycosaminoglycan xylosylkinase-like protein.
      
 0.454
slc35b2
Uncharacterized protein.
   
  
 0.433
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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