STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pds5aUncharacterized protein. (1396 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.977
wapl
WAPL domain-containing protein.
   
 0.956
rad21
Uncharacterized protein.
   
 0.936
LOC103171617
Uncharacterized protein.
   
 0.918
esco2
N-acetyltransferase ESCO2-like protein.
   
 0.841
esco1
Uncharacterized protein.
   
 0.841
stag2
SCD domain-containing protein.
   
 0.829
stag1
SCD domain-containing protein.
   
 0.829
ENSCMIP00000039284
Uncharacterized protein.
   
 0.829
ENSCMIP00000039289
Uncharacterized protein.
   
 0.829
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.