Cald1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Cald1

Uncharacterized protein. (369 aa)

Predicted Functional Partners:

mapk1

0.914

lsp1

0.900

calml6

0.708

calml4

0.707

lmod1

0.634

myh11

0.560

myh9

0.560

myh10

0.560

vcl

0.476

tmod1

0.468

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cald1	calml4	ENSCMIP00000028189	ENSCMIP00000035317	Uncharacterized protein.	Uncharacterized protein.	0.707
Cald1	calml6	ENSCMIP00000028189	ENSCMIP00000017409	Uncharacterized protein.	Uncharacterized protein.	0.708
Cald1	lmod1	ENSCMIP00000028189	ENSCMIP00000002581	Uncharacterized protein.	WH2 domain-containing protein.	0.634
Cald1	lsp1	ENSCMIP00000028189	ENSCMIP00000027472	Uncharacterized protein.	Uncharacterized protein.	0.900
Cald1	mapk1	ENSCMIP00000028189	ENSCMIP00000032576	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.914
Cald1	myh10	ENSCMIP00000028189	ENSCMIP00000042871	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.560
Cald1	myh11	ENSCMIP00000028189	ENSCMIP00000020506	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.560
Cald1	myh9	ENSCMIP00000028189	ENSCMIP00000040938	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.560
Cald1	tmod1	ENSCMIP00000028189	ENSCMIP00000016130	Uncharacterized protein.	Tropomodulin-1.	0.468
Cald1	vcl	ENSCMIP00000028189	ENSCMIP00000020208	Uncharacterized protein.	Uncharacterized protein.	0.476
calml4	Cald1	ENSCMIP00000035317	ENSCMIP00000028189	Uncharacterized protein.	Uncharacterized protein.	0.707
calml4	calml6	ENSCMIP00000035317	ENSCMIP00000017409	Uncharacterized protein.	Uncharacterized protein.	0.900
calml6	Cald1	ENSCMIP00000017409	ENSCMIP00000028189	Uncharacterized protein.	Uncharacterized protein.	0.708
calml6	calml4	ENSCMIP00000017409	ENSCMIP00000035317	Uncharacterized protein.	Uncharacterized protein.	0.900
lmod1	Cald1	ENSCMIP00000002581	ENSCMIP00000028189	WH2 domain-containing protein.	Uncharacterized protein.	0.634
lmod1	myh10	ENSCMIP00000002581	ENSCMIP00000042871	WH2 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.603
lmod1	myh11	ENSCMIP00000002581	ENSCMIP00000020506	WH2 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.603
lmod1	myh9	ENSCMIP00000002581	ENSCMIP00000040938	WH2 domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.603
lmod1	vcl	ENSCMIP00000002581	ENSCMIP00000020208	WH2 domain-containing protein.	Uncharacterized protein.	0.597
lsp1	Cald1	ENSCMIP00000027472	ENSCMIP00000028189	Uncharacterized protein.	Uncharacterized protein.	0.900