STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmrta1DM domain-containing protein. (434 aa)    
Predicted Functional Partners:
ENSCMIP00000000249
Uncharacterized protein.
    
 0.675
szt2
Uncharacterized protein.
    
 0.671
depdc5
DEP domain-containing protein.
   
 0.660
epha5
Uncharacterized protein.
   
  
 0.651
wdr59
Uncharacterized protein.
    
 0.646
nprl2
Uncharacterized protein.
    
 0.632
xrcc4
Uncharacterized protein.
    
 0.517
itfg2
Uncharacterized protein.
    
 0.517
immp1l
Mitochondrial inner membrane protease subunit.
    
 0.517
ENSCMIP00000009815
WD_REPEATS_REGION domain-containing protein.
    
 0.499
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.