STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldh16a1Uncharacterized protein; Belongs to the aldehyde dehydrogenase family. (827 aa)    
Predicted Functional Partners:
LOC103188743
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.953
abat
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.950
LOC103172692
Amine oxidase.
   
 0.942
acsf3
Uncharacterized protein.
  
 0.935
LOC103177252
Amine oxidase.
 
 
 0.932
maob
Amine oxidase.
 
 
 0.932
hibadh
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
   
 0.930
bbox1
Gamma-butyrobetaine dioxygenase-like protein.
   
 0.927
hadh
Uncharacterized protein.
 
 0.926
LOC103176872
Aldo_ket_red domain-containing protein.
   
 0.926
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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