STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr2Uncharacterized protein. (683 aa)    
Predicted Functional Partners:
fig4
SAC domain-containing protein.
     
 0.936
cdipt
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.921
pikfyve
Uncharacterized protein.
     
 0.916
inpp4a
Uncharacterized protein.
   
 
 0.914
pip4k2a
PIPK domain-containing protein.
     
 0.907
pip4k2b
Phosphatidylinositol-5-phosphate 4-kinase type-2 beta-like protein.
     
 0.907
Tmem55a
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.904
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.776
pik3c2a
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.776
pik3c2b
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.776
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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