STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103189967Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
LOC103172408
Uncharacterized protein.
  
0.770
chrna9
Uncharacterized protein.
  
0.748
chrna1
Uncharacterized protein.
  
0.720
Chrna5
Uncharacterized protein.
  
0.712
chrnb3
Uncharacterized protein.
  
0.709
LOC103188367
Uncharacterized protein.
  
0.645
LOC103177707
Uncharacterized protein.
  
0.645
LOC103189465
Uncharacterized protein.
  
0.643
LOC103177744
Uncharacterized protein.
  
0.643
chrnd
Uncharacterized protein.
   
0.632
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.