LOC103176453 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103176453

Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (596 aa)

Predicted Functional Partners:

slc40a1

0.904

cp

0.644

hephl1

0.644

f8

0.585

edil3

0.585

f5

0.585

LOC103176425

0.447

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103176425	LOC103176453	ENSCMIP00000023509	ENSCMIP00000028687	Cytochrome b561 domain-containing protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.447
LOC103176425	slc40a1	ENSCMIP00000023509	ENSCMIP00000035822	Cytochrome b561 domain-containing protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.594
LOC103176453	LOC103176425	ENSCMIP00000028687	ENSCMIP00000023509	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Cytochrome b561 domain-containing protein.	0.447
LOC103176453	cp	ENSCMIP00000028687	ENSCMIP00000023842	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.644
LOC103176453	edil3	ENSCMIP00000028687	ENSCMIP00000016766	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.585
LOC103176453	f5	ENSCMIP00000028687	ENSCMIP00000027689	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.585
LOC103176453	f8	ENSCMIP00000028687	ENSCMIP00000007556	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Uncharacterized protein.	0.585
LOC103176453	hephl1	ENSCMIP00000028687	ENSCMIP00000031122	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Hephaestin-like protein 1; Belongs to the multicopper oxidase family.	0.644
LOC103176453	slc40a1	ENSCMIP00000028687	ENSCMIP00000035822	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.904
cp	LOC103176453	ENSCMIP00000023842	ENSCMIP00000028687	Uncharacterized protein; Belongs to the multicopper oxidase family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.644
cp	edil3	ENSCMIP00000023842	ENSCMIP00000016766	Uncharacterized protein; Belongs to the multicopper oxidase family.	Uncharacterized protein.	0.668
cp	slc40a1	ENSCMIP00000023842	ENSCMIP00000035822	Uncharacterized protein; Belongs to the multicopper oxidase family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.722
edil3	LOC103176453	ENSCMIP00000016766	ENSCMIP00000028687	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585
edil3	cp	ENSCMIP00000016766	ENSCMIP00000023842	Uncharacterized protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.668
edil3	hephl1	ENSCMIP00000016766	ENSCMIP00000031122	Uncharacterized protein.	Hephaestin-like protein 1; Belongs to the multicopper oxidase family.	0.658
edil3	slc40a1	ENSCMIP00000016766	ENSCMIP00000035822	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585
f5	LOC103176453	ENSCMIP00000027689	ENSCMIP00000028687	Uncharacterized protein; Belongs to the multicopper oxidase family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585
f5	slc40a1	ENSCMIP00000027689	ENSCMIP00000035822	Uncharacterized protein; Belongs to the multicopper oxidase family.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585
f8	LOC103176453	ENSCMIP00000007556	ENSCMIP00000028687	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585
f8	slc40a1	ENSCMIP00000007556	ENSCMIP00000035822	Uncharacterized protein.	Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.	0.585

page 1 of 2

Server load: low (28%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2025

Credits

Access

Info

About