STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35a1CMP-sialic acid transporter-like protein. (335 aa)    
Predicted Functional Partners:
slc35c1
TPT domain-containing protein.
   
  
 0.773
Slc35d1
Uncharacterized protein.
   
  
 0.732
Slc35f3
Uncharacterized protein.
      
 0.653
slc35b3
Uncharacterized protein.
   
  
 0.620
slc35e3
TPT domain-containing protein.
      
 0.579
slc39a11
Uncharacterized protein.
   
  
 0.573
Slc30a1
Uncharacterized protein.
  
 
 0.551
nipa1
Magnesium transporter NIPA1-like protein.
   
  
 0.540
nipal1
Uncharacterized protein.
   
  
 0.526
sppl3
Uncharacterized protein.
   
  
 0.471
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.