STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc5a8Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (597 aa)    
Predicted Functional Partners:
npy1r
Neuropeptide Y receptor Y1; Belongs to the G-protein coupled receptor 1 family.
      
 0.578
LOC103187736
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
      
 0.578
gabra2
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.578
gabrb1
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.578
c3
Uncharacterized protein.
      
 0.578
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.575
slc16a1
Monocarboxylate transporter 2-like protein.
      
 0.527
ocln
MARVEL domain-containing protein.
     
 0.526
grm5
G_PROTEIN_RECEP_F3_4 domain-containing protein.
      
 0.526
tjp1
Uncharacterized protein; Belongs to the MAGUK family.
      
 0.521
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.