ccdc85c protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ccdc85c

Uncharacterized protein. (389 aa)

Predicted Functional Partners:

dtwd1

0.648

mphosph10

0.614

nifk

0.609

ebna1bp2

0.552

arhgap21

0.525

ccdc85a

0.480

ccnk

0.474

arhgap23

0.457

ENSCMIP00000036617

0.457

rps19bp1

0.406

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000036617	ccdc85a	ENSCMIP00000036617	ENSCMIP00000005294	Uncharacterized protein.	Uncharacterized protein.	0.455
ENSCMIP00000036617	ccdc85c	ENSCMIP00000036617	ENSCMIP00000030318	Uncharacterized protein.	Uncharacterized protein.	0.457
arhgap21	ccdc85a	ENSCMIP00000006588	ENSCMIP00000005294	Uncharacterized protein.	Uncharacterized protein.	0.527
arhgap21	ccdc85c	ENSCMIP00000006588	ENSCMIP00000030318	Uncharacterized protein.	Uncharacterized protein.	0.525
arhgap23	ccdc85a	ENSCMIP00000036604	ENSCMIP00000005294	Uncharacterized protein.	Uncharacterized protein.	0.455
arhgap23	ccdc85c	ENSCMIP00000036604	ENSCMIP00000030318	Uncharacterized protein.	Uncharacterized protein.	0.457
ccdc85a	ENSCMIP00000036617	ENSCMIP00000005294	ENSCMIP00000036617	Uncharacterized protein.	Uncharacterized protein.	0.455
ccdc85a	arhgap21	ENSCMIP00000005294	ENSCMIP00000006588	Uncharacterized protein.	Uncharacterized protein.	0.527
ccdc85a	arhgap23	ENSCMIP00000005294	ENSCMIP00000036604	Uncharacterized protein.	Uncharacterized protein.	0.455
ccdc85a	ccdc85c	ENSCMIP00000005294	ENSCMIP00000030318	Uncharacterized protein.	Uncharacterized protein.	0.480
ccdc85a	dtwd1	ENSCMIP00000005294	ENSCMIP00000048796	Uncharacterized protein.	DTW domain-containing protein.	0.402
ccdc85c	ENSCMIP00000036617	ENSCMIP00000030318	ENSCMIP00000036617	Uncharacterized protein.	Uncharacterized protein.	0.457
ccdc85c	arhgap21	ENSCMIP00000030318	ENSCMIP00000006588	Uncharacterized protein.	Uncharacterized protein.	0.525
ccdc85c	arhgap23	ENSCMIP00000030318	ENSCMIP00000036604	Uncharacterized protein.	Uncharacterized protein.	0.457
ccdc85c	ccdc85a	ENSCMIP00000030318	ENSCMIP00000005294	Uncharacterized protein.	Uncharacterized protein.	0.480
ccdc85c	ccnk	ENSCMIP00000030318	ENSCMIP00000030326	Uncharacterized protein.	Uncharacterized protein; Belongs to the cyclin family.	0.474
ccdc85c	dtwd1	ENSCMIP00000030318	ENSCMIP00000048796	Uncharacterized protein.	DTW domain-containing protein.	0.648
ccdc85c	ebna1bp2	ENSCMIP00000030318	ENSCMIP00000020137	Uncharacterized protein.	Uncharacterized protein.	0.552
ccdc85c	mphosph10	ENSCMIP00000030318	ENSCMIP00000024568	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.	0.614
ccdc85c	nifk	ENSCMIP00000030318	ENSCMIP00000021100	Uncharacterized protein.	RRM domain-containing protein.	0.609