STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vcpkmtUncharacterized protein. (243 aa)    
Predicted Functional Partners:
vcp
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.975
spata5
Uncharacterized protein.
   
 0.802
spata5l1
Uncharacterized protein.
   
 0.802
mettl18
MTS domain-containing protein.
   
  
 0.620
eef2kmt
Uncharacterized protein.
   
 
 0.559
Etfbkmt
Uncharacterized protein.
      
 0.553
eef1akmt1
Uncharacterized protein.
      
 0.549
ubxn6
UBX domain-containing protein.
    
 
 0.539
eef1akmt2
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
   
  
 0.481
kin
DNA/RNA-binding protein KIN17-like protein.
      
 0.461
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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