STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc91Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
msl3
MRG domain-containing protein.
    
 0.611
klhl42
BTB domain-containing protein.
     
 0.548
msl2
CXC domain-containing protein.
    
 0.546
ENSCMIP00000009538
Uncharacterized protein.
      
 0.451
Tmem151b
Uncharacterized protein.
      
 0.451
LOC103186513
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.431
nup37
WD_REPEATS_REGION domain-containing protein.
   
 0.413
arid4a
ARID domain-containing protein.
    
 0.409
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.